Growth Charts 1.2.2, free OS X software, lets you enter your own data on the CDC growth charts so you can compare at a glance to the U.S. distribution. Sure, you could download the PDFs to print and plot by hand, but this is so much tidier. It's also a reasonable place for me to log all those stats from each pediatrician visit. You can track more than one child (charts go up to 20 years of age). One of my pet peeves for software is locking me into a proprietary file format, but these data are stored in easy-to-read text files. So it's niche software, but if you're interested, Growth Charts is nicely done.
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